RECENT PUBLICATIONS citing the use of custom antibodies generated by YenZym; publications related to post-translational modification-specific antibodies are in the last portion of the list.

 

  1. Du YN, Chou C, Klimstra D, and Varmus H. Receptor for hyaluronan-mediated motility isoform B promotes liver metastasis in a mouse model of multistep tumorigenesis and a tail vein assay for metastasis. PNAS. 2011; 108(40): 16753-16758.

  2. Chih B, Liu P, Chinn Y, Chalouni C, Komuves LG, Hass PE, Sandoval W, and Peterson AS. A ciliopathy complex at the transition zone protects the cilia as a privileged membrane domain. Nature Cell Biology. 2011; doi:10.1038/ncb2410.

  3. Kant S, Swat W, Zhang S, Zhang Z, Neel BG, Flavell RA,Davis RJ. TNF-stimulated MAP kinase activation mediated by a Rho family GTPase signaling pathway. Genes and Development. 2011; 25(19): 2069–2078.

  4. Hsu S, Nafati M, and Inoue K. OEP80, an essential protein paralogous to the chloroplast protein translocation channel Toc75, exists as a 70-kD protein in the Arabidopsis thaliana chloroplast outer envelope. Plant Molecular Biology . 2011; doi: 10.1007/s11103-011-9853-2.

  5. Chen X, Zhuang Y, Wang Q, Moutsoglou D, Ruiz G, Yen SE, and Dreskin SC. Analysis of the Effector Activity of Ara h 2 and Ara h 6 by Selective Depletion from a Crude Peanut Extract. Journal of Immunological Methods. 2011; doi:10.1016/j.jim.2011.06.031.

  6. Zhou M, Hu Q, Li Z, Li D, Chen C, and Luo H. Expression of a Novel Antimicrobial Peptide Penaeidin4-1 in Creeping Bentgrass (Agrostis stolonifera L.) Enhances Plant Fungal Disease Resistance. PLoS ONE. 2011; 6(9): e24677.

  7. Biswas A, Boutaghou MN, Alvey RM, Kronfel CM, Cole RB, Bryant DA, and Schluchter WM. Characterization of the Activities of the CpeY, CpeZ, and CpeS Bilin Lyases in Phycoerythrin Biosynthesis in Fremyella Diplosiphon Strain UTEX 481. The Journal of Biological Chemistry. 2011; doi: 10.1074/jbc.M111.284281.

  8. Castorino JJ, Gallagher-Colombo SM, Levin AV, FitzGerald PG, Polishook J, Kloeckener-Gruissem B, Ostertag E, and Philp NJ. Juvenile Cataract-associated Mutation of Solute Carrier SLC16A12 Impairs Trafficking of the Protein to the Plasma Membrane. Investigative Ophthalmology & Visual Science. 2011; 10-6579.

  9. Singh SK, Brito C, Tan QW, De León M, De León D. Differential Expression and Signaling Activation of Insulin Receptor Isoforms A and B: A Link Between Breast Cancer and Diabetes. Informa Healthcare. 2011; doi:10.3109/08977194.2011.616200.

  10. Wang C, Hennessey JA, Kirkton RD, Wang C, Graham V, Puranam RS, Rosenberg PB, Bursac N, Pitt GS. Fibroblast Growth Factor Homologous Factor 13 Regulates Na+ Channels and Conduction Velocity in Murine Hearts. Circulation Research. 2011; doi: 10.1161/CIRCRESAHA.111.247957.

  11. Ke Y, Huh JW, Warrington R, Li B, Wu N, Leng M, Zhang J, Ball HL, Li B, and Yu H. PICH and BLM Limit Histone Association with Anaphase Centromeric DNA Threads and Promote Their Resolution. The EMBO Journal. 2011; 30, 3309-3321.

  12. Garg S, Sharma M, Ung C, Tuli A, Barral DC, Hava DL, Veerapen N, Besra GS, Hacohen N, and Brenner MB. Lysosomal Trafficking, Antigen Presentation, and Microbial Killing Are Controlled by the Arf-like GTPase Arl8b. Journal of Immunity. 2011; doi:10.1016/j.immuni.2011.06.009.

  13. Cheong H, Lindsten T, Wu J, Lu C, and Thompson CB. Ammonia-induced Autophagy is Independent of ULK1/ULK2 Kinases. PNAS. 2011; doi: 10.1073/pnas.1107969108.

  14. Huang X, Summers MD, Pham V, Lill JR, Liu J, Lee G, Kirkpatrick DS, Jackson PK, Fang G, Dixit VM. Deubiquitinase USP37 Is Activated by CDK2 to Antagonize APCCDH1 and Promote S Phase Entry. Molecular Cell. 2011; 42(4):511-523.

  15. Davis EE, Zhang Q, Liu Q, Diplas BH, Davey LM, Hartley J, Stoetzel C, Szymanska K, Ramaswami G, Logan CV, Muzny DM, Young AC, Wheeler DA, Cruz P, Morgan M, Lewis LR, Cherukuri P, Maskeri B, Hansen NF, Mullikin JC, Blakesley RW, Bouffard GG, Gyapay G, RiegerS, Tönshoff B, Kern I, Soliman NA, Neuhaus TJ, Swoboda KJ, Kayserili H, Gallagher TE, Lewis RA, Bergmann C, Otto EA, Saunier S, Scambler PJ, Beales PL, Gleeson JG, ER Maher, Attié-Bitach T, Dollfus H, Johnson CA, Green ED, Gibbs RA, Hildebrandt F, Pierce EA and Katsanis N. TTC21B Contributes Both Causal and Modifying Alleles Across the Ciliopathy Spectrum. Nature Genetics. 2011; doi:10.1038/ng.756.

  16. Kehat I, Accornero F, Aronow BJ, and Molkentin JD. Modulation of Chromatin Position and Gene Expression by HDAC4 Interaction with Nucleoporins. The Journal of Cell Biology 2011; 193(1): 21-29.

  17. Yang Y, Cochran DA, Gargano MD, King I, Samhat NK, Burger BP, Sabourin KR, Hou Y, Awata J, Parry DAD, Marshall WF, Witman GB, and Lu X. Regulation of flagellar motility by the conserved flagellar protein CG34110/Ccdc135/FAP50, Molecular Biology of the Cell. 2011; 22(7): 976-987.

  18. Szuperák M, Salah S, Meyer EJ, Nagarajan U, Ikmi A and Gibson MC. Feedback Regulation of Drosophila BMP Signaling by the Novel Extracellular Protein Larval Translucida. Development. 2011; 138: 715-724.

  19. Mayer PR, Huang N, Dewey CM, Dries DR, Zhang H, and Yu G. Expression, Localization, and Biochemical Characterization of Nicotinamide Mononucleotide Adenylyltransferase 2. The Journal of Biological Chemistry. 2010; 285: 40387-40396.

  20. Hurov KE, Cotta-Ramusino C, and Elledge SJ. A Genetic Screen Identifies the Triple T Complex Required for DNA Damage Signaling and ATM and ATR Stability. Genes and Development. 2010; 24: 1939-1950

  21. Dynek JN, Goncharov T, Dueber EC, Fedorova AV, Izrael-Tomasevic A, Phu L, Helgason E, Fairbrother WJ, Deshayes K, Kirkpatrick DS, and Vucic D. c-IAP1 and UbcH5 Promote K11-linked Polyubiquitination of RIP1 in TNF Signalling The EMBO Journal. 2010; doi:10.1038/emboj.2010.300.

  22. Ai M, Min S, Grosjean Y, Leblanc C, Bell R, Benton R, and Suh1 GSB. Acid Sensing by the Drosophila Olfactory System. Nature. 2010; doi:10.1038/nature09537.

  23. Daniele LL, Insinna C, Chance R, Wang J, Nikonov SS and Pugh Jr. EN. A Mouse M-opsin Monochromat: Retinal Cone Photoreceptors Have Increased M-opsin Expression When S-opsin is Knocked Out. Vision Research. 2010; doi:10.1016/j.visres.2010.12.017.

  24. Gallagher-Colombo1 S, Maminishkis A, Tate S, Grunwald GB, and Philp NJ. Modulation of MCT3 Expression during Wound Healing of the Retinal Pigment Epithelium. Investigative Ophthalmology & Visual Science. 2010; 51:10 5343-5350.

  25. Chun YHP, Lu Y, Hu Y, Krebsbach PH, Yamada Y, Hu JCC, and Simmer JP. Transgenic Rescue of Enamel Phenotype in Ambn Null Mice. Journal of Dental Research. 2010; 10.1177/0022034510379223.

  26. McGee AM and Baines CP. Complement 1q binding protein inhibits the mitochondrial permeability transition pore and protects against oxidative stress-induced death. Biochemical Journal. 2010; doi:10.1042/BJ20101431.

  27. Doyle JM, Gao J, Wang J, Yang M, and Potts PR. MAGE-RING Protein Complexes Comprise a Family of E3 Ubiquitin Ligases. Molecular Cell. 2010; 39:6 963-974, 24.

  28. Emter CA, and Baines CP. Low-Intensity Aerobic Interval Training Attenuates Pathological Left Ventricular Remodeling and Mitochondrial Dysfunction in Aortic-Banded Miniature Swine. American Journal of Physiology - Heart and Circulatory Physiology 2010; doi:10.1152/ajpheart.00578.2010.

  29. Wang X, Hao J, Xie Y, Sun Y, Hernandez B, Yamoah AK, Prasad M, Zhu Q, Feng JQ, and Qin C. Expression of FAM20C in the Osteogenesis and Odontogenesis of Mouse. Journal of Histochemistry and Cytochemistry. 2010; doi:10.1369/jhc.2010.956565.

  30. Smogorzewska A, Desetty R, Saito TT, Schlabach M, Lach FP, Sowa ME, Clark AB, Kunkel TA, Harper JW, Colaiácovo MP, and Elledge SJ. A Genetic Screen Identifies FAN1, a Fanconi Anemia-Associated Nuclease Necessary for DNA Interstrand Crosslink Repair. Molecular Cell. 2010; 39(1): 36-47.

  31. Al-Anzi B, Armand E, Nagamei P, Olszewski M, Sapin V, Waters C, Zinn K, Wyman RJ, and Benzer S. The Leucokinin Pathway and Its Neurons Regulate Meal Size in Drosophila. Current Biology. 2010; 20(11): 969-978.

  32. Gallagher-Colombo S, Maminishkis A, Tate S, Grunwald GB, and Philp NJ. Expression of MCT3 After Wounding of the RPE Requires Re-epithelialization and Restoration of Cell-cell Contact. Investigative Ophthalmology & Visual Science. 2010; doi:10.1167/iovs.09-5028.

  33. Singh SK, Tan QW, Brito C, De León M and De León D. Insulin-like Growth Factors I and II Receptors in the Breast Cancer Survival Disparity Among African–American Women. Growth Hormone & IGF Research. 2010; 20(3) 245-254.

  34. Gao Z, Liu H, Daxinger L, Pontes O, He X, Qian W, Lin H, Xie M, Lorkovic ZJ, Zhang S, Miki1 D, Zhan X, Pontier D, Lagrange T, Jin H, Matzke AJM, Matzke M, Pikaard CS, and Zhu J. An RNA polymerase II- and AGO4-associated Protein Acts in RNA-directed DNA Methylation. Nature. 2010; doi:10.1038/nature09025.

  35. Dou Y, Balse E, Zadeh AD, Wang T, Goonesekara CL, Noble GP, Eldstrom J, Steele DF, Hatem SN, and Fedida D. Normal Targeting of a Tagged Kv1.5 Channel Acutely Transfected into Fresh Adult Cardiac Myocytes by a Biolistic Method. American Journal of Physiology - Cell Physiology. 2010; doi:10.1152/ajpcell.00005.2010.

  36. Vanzin G, Yu J, Smolinski S, Tek V, Pennington G, and Maness P. Characterization of Genes Responsible for the CO-linked Hydrogen-Production Pathway in Rubrivivax gelatinosus. Applied and Environmental Microbiology. 2010; doi:10.1128/AEM.02753-09.

  37. Raleigh DR, Marchiando AM, Zhang Y, Shen L, Sasaki H, Wang Y, Long M, and Turner JR. Tight Junction–associated MARVEL Proteins MarvelD3, Tricellulin, and Occludin Have Distinct but Overlapping Functions. Molecular Biology of the Cell. 2010; 21(7): 1200-1213.

  38. Gundersen CB, Kohan SA, Souda P, Whitelegge JP, and Umbach JA. Cysteine String Protein β is Prominently Associated with Nerve Terminals and Secretory Organelles in Mouse Brain. Brain Research. 2010: doi:10.1016/j.brainres.2010.03.044.

  39. Kim S, Wairkar YP, Daniels RW, DiAntonio A. The novel endosomal membrane protein Ema interacts with the class C Vps–HOPS complex to promote endosomal maturation. The Journal of Cell Biology. 2010; doi:10.1083/jcb.200911126.

  40. Valdivia CR, Medeiros-Domingo A, Ye B, Shen W, Algiers TJ, Ackerman MJ, and Makielski JC. Loss-of-function Mutation of the SCN3B-encoded Sodium Channel β3 Subunit Associated with a Case of Idiopathic Ventricular Fibrillation. Cardiovascular Research. 2010; 0: cvp417v2-cvp417.

  41. Camahort R, Shivaraju M, Mattingly M, Li B, Nakanishi S, Zhu D, Shilatifard A, Workman JL, and Gerton JL. Cse4 is Part of an Octameric Nucleosome in Budding Yeast. Molecular Cell. 2010; 35:6 794-805.

  42. Singh SK, Tan QW, Brito C, De León, M, Garberoglio C, and De León D. Differential insulin-like growth factor II (IGF-II) expression: A potential role for breast cancer survival disparity. Growth Hormone & IGF Research. 2009; 20(2): 162-170.

  43. Nakayama H, Bodi I, Correll RN, Chen X, Lorenz J, Houser SR, Robbins J, Schwartz A, and Molkentin JD. α1G-dependent T-type Ca2+ current antagonizes cardiac hypertrophy through a NOS3-dependent mechanism in mice. Journal of Clinical Investigation. 2009; 119(2): 3787-3796.

  44. He XJ, Hsu YF, Zhu S, Liu HL, Pontes O, Zhu J, Cui X, Wang CS, and Zhu JK. A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development. Genes and Development. 2009; 23:2717-2722.

  45. Isaac J, Hartney SL, Druffel K, and Hadwiger LA. The non-host disease resistance response in peas; alterations in phosphorylation and ubiquitination of HMG A and histones H2A/H2B. Plant Science. 2009; 177:5 439-449.

  46. Chen F, Shim H, Morhardt D, Dallman R, Krahn E, McWhinney L, Rao A, Gold S, and Chen CK. Functional Redundancy of R7 RGS Proteins in ON-bipolar Cell Dendrites. Investigative Ophthalmology and Visual Science. 2009; 09-4084.

  47. Nagano T, Kakegawa A, Yamakoshi Y, Tsuchiya S, Hu JCC, Gomi K, Arai T, Bartlett JD and Simmer JP. Mmp-20 and Klk4 Cleavage Site Preferences for Amelogenin Sequences. Journal of Dental Research. 2009; 88(9): 823-828.

  48. Simmer JP, Hu Y, Lertlam R, Yamakoshi Y, and Hu JCC. Hypomaturation Enamel Defects in Klk4 Knockout/LacZ Knockin Mice. Journal of Biological Chemistry. 2009; 284(28): 19110-19121.

  49. Khanna H, Davis EE, Murga-Zamalloa CA, Estrada-Cuzcano A, Lopez I, den Hollander AI, Zonneveld MN, Othman MI, Waseem N, Chakarova CF, Maubaret C, Diaz-Font A, MacDonald I, Muzny DM, Wheeler DA, Morgan M, Lewis LR, Logan CV, Tan PL, Beer MA, Inglehearn CF, Lewis RA, Jacobson SG, Bergmann C, Beales PL, Attié-Bitach T, Johnson CA, Otto EA, Bhattacharya SS, Hildebrandt F, Gibbs RA, Koenekoop RK, Swaroop A & Katsanis N. A Common Allele in RPGRIP1L is a Modifier of Retinal Degeneration in Ciliopathies. Nature Genetics. 2009; 41:739-745.

  50. Gao L, Pung YF, Zhang J, Chen P, Wang T, Li M, Meza M, Toro L, and Cai HL. Sepiapterin Reductase Regulation of Endothelial Tetrahydrobiopterin and Nitric Oxide Bioavailability. American Journal of Physiology-Heart and Circulatory Physiology. 2009; 297: H331-H339.

  51. Misaghi S, Ottosen S, Izrael-Tomasevic A, Arnott D, Lamkanfi M, Lee J, Liu J, O'Rourke K, Dixit VM, and Wilson AC. Association of C-Terminal Ubiquitin Hydrolase BRCA1-Associated Protein 1 with Cell Cycle Regulator Host Cell Factor 1. Molecular and Cellular Biology. 2009; 29(8):2181-2192.

  52. Guelman S, Kozuka K, Mao Y, Pham V, Solloway M, Wang J, Wu J, Lill JR, and Zha J. The Double-Histone-Acetyltransferase Complex ATAC Is Essential for Mammalian Development. Molecular and Cellular Biology. 2009; 29(5):1176-1188.

  53. Jung C, Jun C, Ro S, Kim Y, Otto NM, Cao J, Kundu M, and Kim D. ULK-Atg13-FIP200 Complexes Mediate mTOR Signaling to the Autophagy Machinery. Molecular Biology of the Cell. 10.1091/mbc.E08-12-1249.

  54. Gocke C, Yu H. ZNF198 Stabilizes the LSD1–CoREST–HDAC1 Complex on Chromatin through Its MYM-Type Zinc Fingers. PLoS ONE. 2008; 3(9):e3255.

  55. Li S, Jin Z, Koirala S, Bu L, Xu L, Hynes RO, Walsh CA,
    Corfas G, and Piao X. GPR56 Regulates Pial Basement Membrane Integrity and Cortical Lamination. The Journal of Neuroscience. 2008; 28(22):5817–5826.

  56. Wang Z and Sun Y. Identification and Characterization of Two Splicing Variants of Human Noxa. Anticancer Research. 2008; 28:3A 1667-1674.

  57. Yudin AI, Tollner TL, Treece CA, Kays R, Cherr GN, Overstreet1 JW, and Bevins CL. β-Defensin 22 is a major component of the mouse sperm glycocalyx. Reproduction. 2008; 136:753-765.

  58. Soupene E, Serikov V, and Kuypers FA. Characterization of an acyl-coenzyme A binding protein predominantly expressed in human primitive progenitor cells. Journal of Lipid Research. 2008; 49:1103-1112.

  59. Woo S, Kim D, Jun C, Kim Y, Vander Haar E, Lee S, Hegg JW, Bandhakavi S, Griffin TJ, and Kim D. PRR5, A Novel Component of mTOR Complex 2, Regulates PDGFRβ Expression and Signaling. Journal of Biological Chemistry. 2007; 282(35):25604-25612.

  60. Zhao Y, Xiong X, Sun Y. DEPTOR, an mTOR Inhibitor, Is a Physiological Substrate of SCFβTrCP E3 Ubiquitin Ligase and Regulates Survival and Autophagy. Molecular Cell. 2011; doi:10.1016/j.molcel.2011.08.029.

  61. Vaites LP, Lee EK, Lian Z, Barbash O, Roy D, Wasik M, Klein-Szanto AJP, Rustgi AK, and Diehl JA. The Fbx4 Tumor Suppressor Regulates Cyclin D1 Accumulation and Prevents Neoplastic Transformation. Molecular and Cellular Biology 2011; doi:10.1128/MCB.05733-11

  62. Gyenis L, Duncan JC, Turowec JP, Bretner M, and Litchfield DW. Unbiased Functional Proteomics Strategy for Protein Kinase Inhibitor Validation and Identification of Bona Fide Protein Kinase Substrates: Application to Identification of EEF1D as a Substrate for CK2. Journal of Proteome Research 2011; doi: 10.1021/pr2008994.

  63. Caldwell GB, Howe AK, Nick CK, Dostmann WR, Ballif BA, Deming PB. Direct Modulation of the Protein Kinase a Catalytic Subunit α by Growth Factor Receptor Tyrosine Kinases. Journal of Cellular Biochemistry. 2011; doi: 10.1002/jcb.23325.

  64. Hafner AV, Dai J, Gomes AP, Xiao CY, Palmeira CM, Rosenzweig A, and Sinclair DA. Regulation of the mPTP by SIRT3-mediated Deacetylation of CypD at Lysine 166 Suppresses Age-related Cardiac Hypertrophy. Aging. 2010; 2:12 914-923.

  65. Aggarwal P, Vaites LP, Kim JK, Mellert H, Gurung B, Nakagawa H, Herlyn M, Hua X, Rustgi AK, McMahon SB, and Diehl JA. Nuclear Cyclin D1/CDK4 Kinase Regulates CUL4 Expression and Triggers Neoplastic Growth via Activation of the PRMT5 Methyltransferase. Cancer Cell 2010; 18:4 329-340.

  66. Kyriss MNM, Jin Y, Gallegos IJ, Sanford JA, and Wyrick JJ. Novel functional residues in the core domain of histone H2B regulate yeast gene expression and silencing and affect the response to DNA damage. Mol. Cell. Biol. 2010; 30(14) 3503-3518.

  67. Liu Q, Busby JC, Molkentin JD. Interaction between TAK1-TAB1-TAB2 and RCAN1-calcineurin Defines a Signalling Nodal Control Point. Nature Cell Biology. 2009; 11(2):154-161.

  68. MacDonnell SM, Weisser-Thomas J, Kubo H, Hanscome M, Liu Q, Jaleel N, Berretta R, Chen X, Brown JH, Sabri A, Molkentin JD and Houser SR. CaMKII Negatively Regulates Calcineurin NFAT Signaling in Cardiac Myocytes. Circulation Research. 2009; 105:316-325.

  69. Lin D, Aggrawal P, Diehl JA. Phosphorylation of MCM3 on Ser-112 regulates its incorporation into the MCM2–7 complex. PNAS. 2008; 105(23):8079-8084.

  70. Barbash O, Zamfirova P, Lin DI, Chen X, Yang K, Nakagawa H, Lu F, Rustgi A, Diehl JA. Mutations in Fbx4 Inhibit Dimerization of the SCFFbx4 Ligase and Contribute to Cyclin D1 Overexpression in Human Cancer. Cancer Cell. 2008; 14(1):68-78.

 

 

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